数列{an}是公差不为0的等差数列,设公差为d,∵S1,S2,S4成等比数列,∴S22=S1?S4,∴( 2a1+d)2=a1?(4a1+6d),化简可得d=2a1,∵S3=9,∴3a1+3d=9,∴a1=1,d=2,∴a7=a1+6d=13.故选:C.